BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026C01LP1|AL428508
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1669 1656 0.0
>3x_Contig1669
Length = 15503
Score = 1656 bits (831), Expect = 0.0
Identities = 862/876 (98%), Gaps = 1/876 (0%)
Strand = Plus / Plus
Query: 1 attgtattattatttgtatatacatatatgatacgatattagatgaataaagaaataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1989 attgtattattatttgtatatacatatatgatacgatattagatgaataaagaaataaat 2048
Query: 61 ggcattgcgaggragtggaataaaattctccttaagctgtttagatcttttcagccttga 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2049 ggcattgcgaggaagtggaataaaattctccttaagctgtttagatcttttcagccttga 2108
Query: 121 caccgtgcttccagatagcgacgaatggrgtggkaccatcttcacggtagttcaacaaga 180
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 2109 caccgtgcttccagatagcgacgaatggagtggtaccatcttcacggtagttcaacaaga 2168
Query: 181 ccaacattccatctggggccatggattcaccagtgaagaattcccagtccttgaaagaac 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2169 ccaacattccatctgggtccatggattcaccagtgaagaattcccagtccttgaaagaac 2228
Query: 241 cgataaccttcttgacgtaagcttgagcacctttttcgaaaacgctaacttcgtctgggg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2229 cgataaccttcttgacgtaagcttgagcacctttttcgaaaacgctaacttcgtctgggt 2288
Query: 301 tagattcttgcaatctacccttgatttccttcatgtaacccttgatgtwagtcaagaaag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2289 tagattcttgcaatctacccttgatttccttcatgtaacccttgatgtaagtcaagaaag 2348
Query: 361 atttcttgtcgaaagcagtttgttgcaaacgggaagagtgaacaacattgttgaccaatt 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2349 atttcttgtcgaaagcagtttgttgcaaacggaaagagtgaacaacattgttgaccaatt 2408
Query: 421 cagtaccatcttcgacgtcgtcaccaccgtcttcagcagatgggttggcaccgatatcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 cagtaccatcttcgacgtcgtcaccaccgtcttcagcagatgggttggcaccgatatcga 2468
Query: 481 tgttgtcaccaccaaccttgaccatgtcacagtcagcttcgtaaatgacaccgtcaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 tgttgtcaccaccaaccttgaccatgtcacagtcagcttcgtaaatgacaccgtcaacca 2528
Query: 541 acttcaagtcgtaggcgtcggacaatagttcgtcaccagagataatatcagtgttaatga 600
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2529 acttcaagtcgtaggcatcggacaatagttcgtcaccagagataatatcagtgtaaatga 2588
Query: 601 tcatgttgctattgtatcagggrtcgattgatgttctcttcacgggrtgtaagataaagc 660
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 2589 tcatgttgctattgtatcagggatcgattgatgttctcttcacgggatgtaagataaagc 2648
Query: 661 taaactaaactaaaactaaattaaatcaactatccaaaaagattacaaaacaatcattac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 taaactaaactaaaactaaattaaatcaactatccaaaaagattacaaaacaatcattac 2708
Query: 721 aaagaataaaatattcaaaggaaataaataacatcatgcactaaaatgtaatttaaaacc 780
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 aaagaat-aaatattcaaaggaaataaataacatcatgcactaaaatgtaatttaaaacc 2767
Query: 781 aagaagaaatacctctaaacaatgaaaagaattaattttatcttgatatccaatgttcat 840
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2768 aagaagaaatacctctaaacaatgaaaagaattaattntatcttgatatccaatgttcat 2827
Query: 841 catgtgcatcgaatttccatcctttatatwaacctt 876
||||||||||||||||||||||||||||| ||||||
Sbjct: 2828 catgtgcatcgaatttccatcctttatataaacctt 2863
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7704
Number of Sequences: 1807
Number of extensions: 7704
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)